| _bimFile | sampFiles::BedFile | protected |
| _elemSize | sampFiles::GbinFile | protected |
| _famFile | sampFiles::BedFile | protected |
| _famLines() | sampFiles::BedFileI | protected |
| _famLines(fstream &fam) | sampFiles::BedFileI | protected |
| _fileName | sampFiles::GbinFile | protected |
| _fileStub | sampFiles::BedFile | protected |
| _ld(const char *snp1, const char *snp2, const size_t &N, const unsigned short &pad, double &rSq, double &Dprime, double &dcnt1, double &dcnt2) | sampFiles::BedFileI | protected |
| _ld(const char *snp1, const char *snp2, const PopIndex &popID, vector< double > &rSq, vector< double > &Dprime, vector< double > &dcnt1, vector< double > &dcnt2) | sampFiles::BedFileI | protected |
| _masks | sampFiles::BedFile | protectedstatic |
| _nCols | sampFiles::GbinFile | protected |
| _numLines() | sampFiles::BedFileI | protected |
| _tests | sampFiles::BedFile | protectedstatic |
| _varFile | sampFiles::VarFile | protected |
| BedFile() | sampFiles::BedFile | |
| BedFile(const string &stubName) | sampFiles::BedFile | |
| BedFile(const BedFile &in)=default | sampFiles::BedFile | |
| BedFile(BedFile &&in)=default | sampFiles::BedFile | |
| BedFileI() | sampFiles::BedFileI | inline |
| BedFileI(const string &stubName) | sampFiles::BedFileI | inline |
| BedFileI(const BedFileI &in)=default | sampFiles::BedFileI | |
| BedFileI(BedFileI &&in)=default | sampFiles::BedFileI | |
| close() | sampFiles::BedFile | virtual |
| GbinFile() | sampFiles::GbinFile | inline |
| GbinFile(const string &fileName, const size_t &nCols, const size_t &elemSize) | sampFiles::GbinFile | inline |
| GbinFile(const GbinFile &in)=default | sampFiles::GbinFile | |
| GbinFile(GbinFile &&in)=default | sampFiles::GbinFile | |
| nindiv() | sampFiles::BedFileI | inline |
| nsnp() | sampFiles::BedFileI | inline |
| open() | sampFiles::BedFileI | virtual |
| operator=(const BedFileI &in)=default | sampFiles::BedFileI | |
| operator=(BedFileI &&in)=default | sampFiles::BedFileI | |
| sampFiles::BedFile::operator=(const BedFile &in)=default | sampFiles::BedFile | |
| sampFiles::BedFile::operator=(BedFile &&in)=default | sampFiles::BedFile | |
| sampFiles::GbinFile::operator=(const GbinFile &in)=default | sampFiles::GbinFile | |
| sampFiles::GbinFile::operator=(GbinFile &&in)=default | sampFiles::GbinFile | |
| sampFiles::VarFile::operator=(const VarFile &in)=default | sampFiles::VarFile | |
| sampFiles::VarFile::operator=(VarFile &&in)=default | sampFiles::VarFile | |
| sample(BedFileO &out, const uint64_t &n) | sampFiles::BedFileI | |
| sampleLD(const uint64_t &n) | sampFiles::BedFileI | |
| sampleLD(const PopIndex &popID, const uint64_t &n) | sampFiles::BedFileI | |
| VarFile() | sampFiles::VarFile | inlineprotected |
| VarFile(const VarFile &in)=default | sampFiles::VarFile | |
| VarFile(VarFile &&in)=default | sampFiles::VarFile | |
| ~BedFile() | sampFiles::BedFile | |
| ~BedFileI() | sampFiles::BedFileI | inline |
| ~GbinFile() | sampFiles::GbinFile | inline |
| ~VarFile() | sampFiles::VarFile | inline |
