Sample SNPs
Fast ordered sampling of rows from large text or binary files. Special cases for DNA variant files (.bed, VCF, HapMap, etc).
sampFiles::TpedFileI Member List

This is the complete list of members for sampFiles::TpedFileI, including all inherited members.

_famCopy(fstream &fam)sampFiles::TpedFileIprotected
_famLines()sampFiles::TpedFileIprotected
_famLines(fstream &fam)sampFiles::TpedFileIprotected
_fileNamesampFiles::GtxtFileprotected
_fileStubsampFiles::TpedFileprotected
_headsampFiles::GtxtFileprotected
_numLines()sampFiles::TpedFileIprotected
_tfamFilesampFiles::TpedFileprotected
_varFilesampFiles::VarFileprotected
close()sampFiles::TpedFilevirtual
GtxtFile()sampFiles::GtxtFileinline
GtxtFile(const string &fileName)sampFiles::GtxtFileinline
GtxtFile(const string &fileName, const bool &head)sampFiles::GtxtFileinline
GtxtFile(const GtxtFile &in)=defaultsampFiles::GtxtFile
GtxtFile(GtxtFile &&in)=defaultsampFiles::GtxtFile
nindiv()sampFiles::TpedFileIinline
nsnp()sampFiles::TpedFileIinline
open()sampFiles::TpedFileIvirtual
operator=(const TpedFileI &in)=defaultsampFiles::TpedFileI
operator=(TpedFileI &&in)=defaultsampFiles::TpedFileI
sampFiles::TpedFile::operator=(const TpedFile &in)=defaultsampFiles::TpedFile
sampFiles::TpedFile::operator=(TpedFile &&in)=defaultsampFiles::TpedFile
sampFiles::GtxtFile::operator=(const GtxtFile &in)=defaultsampFiles::GtxtFile
sampFiles::GtxtFile::operator=(GtxtFile &&in)=defaultsampFiles::GtxtFile
sampFiles::VarFile::operator=(const VarFile &in)=defaultsampFiles::VarFile
sampFiles::VarFile::operator=(VarFile &&in)=defaultsampFiles::VarFile
sample(TpedFileO &out, const uint64_t &n)sampFiles::TpedFileI
TpedFile()sampFiles::TpedFileinline
TpedFile(const string &stubName)sampFiles::TpedFileinline
TpedFile(const TpedFile &in)=defaultsampFiles::TpedFile
TpedFile(TpedFile &&in)=defaultsampFiles::TpedFile
TpedFileI()sampFiles::TpedFileIinline
TpedFileI(const string &stubName)sampFiles::TpedFileIinline
TpedFileI(const TpedFileI &in)=defaultsampFiles::TpedFileI
TpedFileI(TpedFileI &&in)=defaultsampFiles::TpedFileI
VarFile()sampFiles::VarFileinlineprotected
VarFile(const VarFile &in)=defaultsampFiles::VarFile
VarFile(VarFile &&in)=defaultsampFiles::VarFile
~GtxtFile()sampFiles::GtxtFileinline
~TpedFile()sampFiles::TpedFile
~TpedFileI()sampFiles::TpedFileIinline
~VarFile()sampFiles::VarFileinline
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