sampleSNPs.cpp File Reference

Sample SNPs. More...

#include <iostream>
#include <string>
#include <vector>
#include <unordered_map>
#include <cmath>
#include "varfiles.hpp"

Include dependency graph for sampleSNPs.cpp:

Functions
void	parseCL (int &argc, char **argv, unordered_map< char, string > &cli)
	Command line parser. More...
int	main (int argc, char *argv[])

Detailed Description

Sample SNPs.

Author

Anthony J. Greenberg

Copyright

Copyright (c) 2017 Anthony J. Greenberg

Version

0.5

Using the varfiles library to sample SNPs from a variety of file formats.

Function Documentation

parseCL()

void parseCL	(	int &	argc,
		char **	argv,
		unordered_map< char, string > &	cli
	)

Command line parser.

Maps flags to values. Flags assumed to be of the form -x.

Parameters

[in]	argc	size of the argv array
[in]	argv	command line input array
[out]	cli	map of tags to values