| MuGen
    Multitrait genetics | 
| Functions | |
| virtual void | MVnorm::update (const Grp &, const SigmaI &, const SigmaI &, const gsl_rng *)=0 | 
| Gaussian likelihood, Gaussian prior.  More... | |
| virtual void | MVnorm::update (const Grp &, const SigmaI &, const double &, const SigmaI &, const gsl_rng *)=0 | 
| Gaussian likelihood, Student- \(t\) prior.  More... | |
| virtual void | MVnorm::update (const Grp &, const Qgrp &, const SigmaI &, const SigmaI &, const gsl_rng *)=0 | 
| Student- \(t\) likelihood, Gaussian prior.  More... | |
| virtual void | MVnorm::update (const Grp &, const Qgrp &, const SigmaI &, const double &, const SigmaI &, const gsl_rng *)=0 | 
| Student- \(t\) likelihood, Student- \(t\) prior.  More... | |
| virtual void | Grp::update (const Grp &, const SigmaI &, const SigmaI &)=0 | 
| Gaussian likelihood, 0-mean Gaussian prior.  More... | |
| virtual void | Grp::update (const Grp &, const Qgrp &, const SigmaI &, const SigmaI &)=0 | 
| Student- \(t\) likelihood, 0-mean Gaussian prior.  More... | |
| virtual void | Grp::update (const Grp &, const SigmaI &, const Qgrp &, const SigmaI &)=0 | 
| Gaussian likelihood, 0-mean Student- \(t\) prior.  More... | |
| virtual void | Grp::update (const Grp &, const Qgrp &, const SigmaI &, const Qgrp &, const SigmaI &)=0 | 
| Student- \(t\) likelihood, 0-mean Student- \(t\) prior.  More... | |
| 
 | pure virtual | 
Student- \(t\) likelihood, Student- \(t\) prior.
| [in] | Grp& | data for the likelihood | 
| [in] | Qgrp& | vector Student- \(t\) covariance scale parameter for the likelihood covariance | 
| [in] | SigmaI& | inverse-covariance matrix for the likelihood | 
| [in] | double& | Student- \(t\) scale parameter for the prior covariance | 
| [in] | SigmaI& | prior inverse-covariance matrix | 
| [in] | gsl_rng* | pointer to a PNG | 
Implemented in MVnormBetaFt, MVnormMuBlk, MVnormBetaPEX, MVnormMuPEX, MVnormMu, MVnormBetaFtBlk, MVnormBetaBlk, and MVnormBeta.
| 
 | pure virtual | 
Student- \(t\) likelihood, 0-mean Student- \(t\) prior.
| [in] | Grp& | data | 
| [in] | Qgrp& | Student- \(t\) weight parameter for the data | 
| [in] | SigmaI& | data inverse-covariance | 
| [in] | Qgrp& | Student- \(t\) weight parameter for the prior | 
| [in] | SigmaI& | prior inverse-covariance | 
Implemented in MuBlk, BetaGrpPCpex, BetaGrpPEX, BetaGrpFt, MuGrpPEX, and MuGrp.
| 
 | pure virtual | 
Student- \(t\) likelihood, 0-mean Gaussian prior.
| [in] | Grp& | data | 
| [in] | Qgrp& | Student- \(t\) weight parameter for data | 
| [in] | SigmaI& | data inverse-covariance | 
| [in] | SigmaI& | prior inverse-covariance | 
Implemented in MuBlk, BetaGrpPCpex, BetaGrpPEX, BetaGrpFt, MuGrpPEX, and MuGrp.
| 
 | pure virtual | 
Student- \(t\) likelihood, Gaussian prior.
| [in] | Grp& | data for the likelihood | 
| [in] | Qgrp& | vector of Student- \(t\) covariance scale parameters for the likelihood covariance | 
| [in] | SigmaI& | inverse-covariance matrix for the likelihood | 
| [in] | SigmaI& | prior inverse-covariance matrix | 
| [in] | gsl_rng* | pointer to a PNG | 
Implemented in MVnormBetaFt, MVnormMuBlk, MVnormBetaPEX, MVnormMuPEX, MVnormMu, MVnormBetaFtBlk, MVnormBetaBlk, and MVnormBeta.
| 
 | pure virtual | 
Gaussian likelihood, Student- \(t\) prior.
| [in] | Grp& | data for the likelihood | 
| [in] | SigmaI& | inverse-covariance matrix for the likelihood | 
| [in] | double& | Student- \(t\) scale parameter for the prior covariance | 
| [in] | SigmaI& | prior inverse-covariance matrix | 
| [in] | gsl_rng* | pointer to a PNG | 
Implemented in MVnormBetaFt, MVnormMuBlk, MVnormBetaPEX, MVnormMuPEX, MVnormMu, MVnormBetaFtBlk, MVnormBetaBlk, and MVnormBeta.
| 
 | pure virtual | 
Gaussian likelihood, 0-mean Student- \(t\) prior.
| [in] | Grp& | data | 
| [in] | SigmaI& | data inverse-covariance | 
| [in] | Qgrp& | Student- \(t\) weight parameter for the prior | 
| [in] | SigmaI& | prior inverse-covariance | 
Implemented in MuBlk, BetaGrpPCpex, BetaGrpPEX, BetaGrpFt, MuGrpPEX, and MuGrp.
Gaussian likelihood, 0-mean Gaussian prior.
| [in] | Grp& | data | 
| [in] | SigmaI& | data inverse-covariance | 
| [in] | SigmaI& | prior inverse-covariance | 
Implemented in MuGrpMiss, MuBlk, BetaGrpPCpex, BetaGrpPEX, BetaGrpFt, MuGrpPEX, and MuGrp.
| 
 | pure virtual | 
Gaussian likelihood, Gaussian prior.
| [in] | Grp& | data for the likelihood | 
| [in] | SigmaI& | inverse-covariance matrix for the likelihood | 
| [in] | SigmaI& | prior inverse-covariance matrix | 
| [in] | gsl_rng* | pointer to a PNG | 
Implemented in MVnormBetaFt, MVnormMuMiss, MVnormMuBlk, MVnormBetaPEX, MVnormMuPEX, MVnormMu, MVnormBetaFtBlk, MVnormBetaBlk, and MVnormBeta.