isoSeqQC
Quality assessment and re-mapping of poorly mapped isoSeq read segments
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isaSpace::BAMfile Member List

This is the complete list of members for isaSpace::BAMfile, including all inherited members.

addRemaps(const std::string &remapBAMfileName, const float &remapIdentityCutoff)isaSpace::BAMfile
BAMfile()=defaultisaSpace::BAMfile
BAMfile(const std::string &BAMfileName)isaSpace::BAMfile
BAMfile(const BAMfile &toCopy)=deleteisaSpace::BAMfile
BAMfile(BAMfile &&toMove) noexcept=defaultisaSpace::BAMfile
getPrimaryAlignmentCount() const noexceptisaSpace::BAMfile
operator=(const BAMfile &toCopy)=deleteisaSpace::BAMfile
operator=(BAMfile &&toMove) noexcept=defaultisaSpace::BAMfile
saveRemappedBAM(const std::string &outputBAMfileName) constisaSpace::BAMfile
saveSortedRemappedBAM(const std::string &outputBAMfileName) constisaSpace::BAMfile
~BAMfile()=defaultisaSpace::BAMfile