vash
Fast genetic similarity estimation with hash tables
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BayesicSpace::GenoTableHash Member List

This is the complete list of members for BayesicSpace::GenoTableHash, including all inherited members.

allHashLD(const float &similarityCutOff, const InOutFileNames &bimAndLDnames, const size_t &suggestNchunks=static_cast< size_t >(1)) constBayesicSpace::GenoTableHash
GenoTableHash()BayesicSpace::GenoTableHashinline
GenoTableHash(const std::string &inputFileName, const IndividualAndSketchCounts &indivSketchCounts, const size_t &nThreads, std::string logFileName)BayesicSpace::GenoTableHash
GenoTableHash(const std::string &inputFileName, const IndividualAndSketchCounts &indivSketchCounts, std::string logFileName)BayesicSpace::GenoTableHashinline
GenoTableHash(const std::vector< int > &maCounts, const IndividualAndSketchCounts &indivSketchCounts, const size_t &nThreads, std::string logFileName)BayesicSpace::GenoTableHash
GenoTableHash(const std::vector< int > &maCounts, const IndividualAndSketchCounts &indivSketchCounts, std::string logFileName)BayesicSpace::GenoTableHashinline
GenoTableHash(const GenoTableHash &toCopy)=deleteBayesicSpace::GenoTableHash
GenoTableHash(GenoTableHash &&toMove) noexcept=defaultBayesicSpace::GenoTableHash
ldInGroups(const SparsityParameters &sparsityValues, const InOutFileNames &bimAndLDnames, const size_t &suggestNchunks=static_cast< size_t >(1)) constBayesicSpace::GenoTableHash
makeLDgroups(const size_t &nRowsPerBand) constBayesicSpace::GenoTableHash
makeLDgroups(const size_t &nRowsPerBand, const InOutFileNames &bimAndGroupNames) constBayesicSpace::GenoTableHash
operator=(const GenoTableHash &toCopy)=deleteBayesicSpace::GenoTableHash
operator=(GenoTableHash &&toMove) noexcept=defaultBayesicSpace::GenoTableHash
saveLogFile() constBayesicSpace::GenoTableHash
~GenoTableHash()=defaultBayesicSpace::GenoTableHash