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vash
Fast genetic similarity estimation with hash tables
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| ▼NBayesicSpace | |
| CBedDataStats | Attributes of .bed format loci |
| CCountAndSize | Number of items and their size |
| CFullIdxValue | Full vectorized index and similarity value |
| CGenoTableBin | Class to store binary compressed genotype tables |
| CGenoTableHash | Class to store compressed genotype tables |
| CHashGroup | Hash-derived group |
| CHashGroupItPairCount | Hash group vector iterator and element number |
| CIndividualAndSketchCounts | Number of individuals and sketches |
| CInOutFileNames | Input and output file names |
| CJaccardPair | Pair of integers to calculate Jaccard similarity |
| CLocationWithLength | Window location and extent |
| CRowColIdx | Row and column index pair |
| CSimilarityMatrix | Similarity matrix |
| CSparsityParameters | LD matrix sparsity parameters |