isaSpace::BinomialWindowParameters Struct Reference

Binomial window parameters. More...

#include <isoseqAlgn.hpp>

Collaboration diagram for isaSpace::BinomialWindowParameters:

Public Attributes
float	currentProbability {0.0F}
	Probability of success up to this window.
float	alternativeProbability {0.0F}
	Probability of success to consider as an alternative.
float	bicDifferenceThreshold {0.0F}
	Minimum difference in BIC between windows with current and alternative probabilities.
std::vector< std::pair< float, hts_pos_t > >::difference_type	windowSize {0}
	Window size.

Detailed Description

Binomial window parameters.

Member Data Documentation

alternativeProbability

float isaSpace::BinomialWindowParameters::alternativeProbability {0.0F}

Probability of success to consider as an alternative.

Test for a switch to this probability when assessing evidence for a change point between mapped and unmapped regions of a read.

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The documentation for this struct was generated from the following file:

• isoseqAlgn.hpp