vash
Fast genetic similarity estimation with hash tables
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Here is a list of all documented variables with links to the class documentation for each member:
count :
BayesicSpace::CountAndSize
cumulativeNpairs :
BayesicSpace::HashGroup
firstLocusIdx :
BayesicSpace::BedDataStats
fullIdx :
BayesicSpace::FullIdxValue
hgIterator :
BayesicSpace::HashGroupItPairCount
inputFileName :
BayesicSpace::InOutFileNames
iRow :
BayesicSpace::RowColIdx
jCol :
BayesicSpace::RowColIdx
kSketches :
BayesicSpace::IndividualAndSketchCounts
length :
BayesicSpace::LocationWithLength
locusIndexes :
BayesicSpace::HashGroup
nBytesPerLocus :
BayesicSpace::BedDataStats
nBytesToRead :
BayesicSpace::BedDataStats
nIndividuals :
BayesicSpace::IndividualAndSketchCounts
nIntersect :
BayesicSpace::JaccardPair
nLociPerThread :
BayesicSpace::BedDataStats
nLociToRead :
BayesicSpace::BedDataStats
nMemChunks :
BayesicSpace::BedDataStats
nRowsPerBand :
BayesicSpace::SparsityParameters
nUnion :
BayesicSpace::JaccardPair
outputFileName :
BayesicSpace::InOutFileNames
pairCount :
BayesicSpace::HashGroupItPairCount
quantSimilarity :
BayesicSpace::FullIdxValue
similarityCutOff :
BayesicSpace::SparsityParameters
size :
BayesicSpace::CountAndSize
start :
BayesicSpace::LocationWithLength
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